Structure of PDB 6lqm Chain J

Receptor sequence
>6lqmJ (length=154) Species: 9606 (Homo sapiens) [Search protein sequence]
RIFDLGRKKAKVDEFPLGGHMVSDEYEQLSSEALEAARICANKYMVKSCG
RDGFHMRVRLHPFHTVARVHIGQVIMSIRTKLQNEEHVIEALRRAKFKFP
GRQKIHISKKWGFTKFNADEFEDMVAKKCLIPDGCGVKYVPSHGPLDKWR
VLHS
3D structure
PDB6lqm Structural snapshots of human pre-60S ribosomal particles before and after nuclear export.
ChainJ
Resolution3.09 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna J D35 K39 E63 A64 R88 R90 H92 F94 Q133 R154 F157 K158 P160 K175 G194 C195 K198 R210 D4 K8 E32 A33 R57 R59 H61 F63 Q73 R94 F97 K98 P100 K115 G134 C135 K138 R150
BS02 rna J E56 Y57 Y199 S202 H203 G204 P205 W209 E25 Y26 Y139 S142 H143 G144 P145 W149
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0006412 translation
GO:0007141 male meiosis I
GO:0007283 spermatogenesis
GO:0030154 cell differentiation
GO:0051321 meiotic cell cycle
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005783 endoplasmic reticulum
GO:0005829 cytosol
GO:0005840 ribosome
GO:0016020 membrane
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:6lqm, PDBe:6lqm, PDBj:6lqm
PDBsum6lqm
PubMed32669547
UniProtQ96L21|RL10L_HUMAN Ribosomal protein uL16-like (Gene Name=RPL10L)

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