Structure of PDB 6l9n Chain J

Receptor sequence
>6l9nJ (length=278) Species: 9606 (Homo sapiens) [Search protein sequence]
AGPHSMRYFETAVSRPGLGEPRYISVGYVDNKEFVRFDSDAENPRYEPQA
PWMEQEGPEYWERITQIAKGQEQWFRVNLRTLLGYYNQSAGGTHTLQWMY
GCDVGSDGRLLRGYEQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQ
AGAAEYYRAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEV
TLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVV
PLGKEQNYTCRVYHEGLPEPLTLRWEPP
3D structure
PDB6l9n Structures suggest an approach for converting weak self-peptide tumor antigens into superagonists for CD8 T cells in cancer.
ChainJ
Resolution2.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide J Y7 R62 I66 Q70 W73 N77 L81 Y84 W97 Y99 Y123 T143 K146 W147 A152 Y155 Y156 Y159 W167 Y171 Y8 R63 I67 Q71 W74 N78 L82 Y85 W98 Y100 Y124 T144 K147 W148 A153 Y156 Y157 Y160 W168 Y172
External links
PDB RCSB:6l9n, PDBe:6l9n, PDBj:6l9n
PDBsum6l9n
PubMed34074778
UniProtP01897|HA1L_MOUSE H-2 class I histocompatibility antigen, L-D alpha chain (Gene Name=H2-L)

[Back to BioLiP]