Structure of PDB 6cas Chain J

Receptor sequence
>6casJ (length=98) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
KIRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRG
PFKHKDSREHFELRTHNRLVDIINPNRKTIEQLMTLDLPTGVEIEIKT
3D structure
PDB6cas Aminoglycoside ribosome interactions reveal novel conformational states at ambient temperature.
ChainJ
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna J R5 K7 H13 S35 P37 I38 L40 P41 R43 V44 R45 T48 R51 G52 F54 K55 H56 K57 S59 R60 H62 H68 D73 R3 K5 H11 S33 P35 I36 L38 P39 R41 V42 R43 T46 R49 G50 F52 K53 H54 K55 S57 R58 H60 H66 D71
BS02 MG J K57 R60 K55 R58
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:6cas, PDBe:6cas, PDBj:6cas
PDBsum6cas
PubMed30113694
UniProtQ5SHN7|RS10_THET8 Small ribosomal subunit protein uS10 (Gene Name=rpsJ)

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