Structure of PDB 5ot7 Chain J

Receptor sequence
>5ot7J (length=119) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYA
AQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVD
DTPVPHNGCRPKKKFRKAS
3D structure
PDB5ot7 The structure of an elongation factor G-ribosome complex captured in the absence of inhibitors.
ChainJ
Resolution3.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna J Y20 N26 N27 G37 N38 P39 I40 W42 S44 G46 V47 K51 G52 S53 R54 R85 V114 H116 N117 G118 C119 R120 P121 K122 K123 K124 R126 Y10 N16 N17 G27 N28 P29 I30 W32 S34 G36 V37 K41 G42 S43 R44 R75 V104 H106 N107 G108 C109 R110 P111 K112 K113 K114 R116
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5ot7, PDBe:5ot7, PDBj:5ot7
PDBsum5ot7
PubMed29408956
UniProtP80376|RS11_THET8 Small ribosomal subunit protein uS11 (Gene Name=rpsK)

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