Structure of PDB 5nmg Chain J

Receptor sequence

>5nmgJ (length=241) Species: 9606 (Homo sapiens) [Search protein sequence]

AGVTQSPTHLIKTRGQQVTLRCSPKQGHDTVSWYQQALGQGPQFIFQYYE
EEERQRGNFPDRFSGHQFPNYSSELNVNALLLGDSALYLCASSDTVSYEQ
YFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPD
HVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQD
PRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD

3D structure

PDB

5nmg Dual Molecular Mechanisms Govern Escape at Immunodominant HLA A2-Restricted HIV Epitope.

Chain

Resolution

2.75 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	J	T96 Y99	T95 Y98

External links

PDB	RCSB:5nmg, PDBe:5nmg, PDBj:5nmg
PDBsum	5nmg
PubMed	29209312

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