Structure of PDB 5lmo Chain J

Receptor sequence
>5lmoJ (length=98) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
KIRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRG
PFKHKDSREHFELRTHNRLVDIINPNRKTIEQLMTLDLPTGVEIEIKT
3D structure
PDB5lmo Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
ChainJ
Resolution4.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna J R5 K7 R9 H13 G36 I38 P39 P41 T42 R43 V44 R45 T48 R51 P53 F54 K55 H56 K57 H68 D73 K99 R3 K5 R7 H11 G34 I36 P37 P39 T40 R41 V42 R43 T46 R49 P51 F52 K53 H54 K55 H66 D71 K97
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:5lmo, PDBe:5lmo, PDBj:5lmo
PDBsum5lmo
PubMed27662086
UniProtQ5SHN7|RS10_THET8 Small ribosomal subunit protein uS10 (Gene Name=rpsJ)

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