Structure of PDB 5eoc Chain J

Receptor sequence

>5eocJ (length=214) Species: 10090 (Mus musculus) [Search protein sequence]

VQLQQPGAELVRPGGSVKLSCKASGYSFTTYWMMWVKQRPGQGLEWIGMI
QPSDSETRLNQKFKDKATLTLDRSSSTVYMQLSSPTSDDSAVYYCARTGR
GDAWLTYWGQGTSVTVSSAKTTPPSVYPLAPGSNSMVTLGCLVKGYFPEP
VTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAH
PASSTKVDKKIVPR

3D structure

PDB

5eoc Generation and Characterization of Monoclonal Antibodies against a Cyclic Variant of Hepatitis C Virus E2 Epitope 412-422.

Chain

Resolution

1.98 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	J	R59 R101 G102 D103	R58 R100 G101 D102

External links

PDB	RCSB:5eoc, PDBe:5eoc, PDBj:5eoc
PDBsum	5eoc
PubMed	26819303

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