Structure of PDB 5eex Chain J

Receptor sequence
>5eexJ (length=67) Species: 1422 (Geobacillus stearothermophilus) [Search protein sequence]
SDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIK
VRGKAYIQTRHGVIESE
3D structure
PDB5eex RNA protects a nucleoprotein complex against radiation damage.
ChainJ
Resolution1.98 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 TRP J G23 H34 Q47 T49 T52 I55 G17 H28 Q41 T43 T46 I49
BS02 TRP J T25 R26 G27 D29 T30 S53 T19 R20 G21 D23 T24 S47
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0042802 identical protein binding
Biological Process
GO:0006353 DNA-templated transcription termination
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5eex, PDBe:5eex, PDBj:5eex
PDBsum5eex
PubMed27139628
UniProtQ9X6J6|MTRB_GEOSE Transcription attenuation protein MtrB (Gene Name=mtrB)

[Back to BioLiP]