Structure of PDB 5d2l Chain J

Receptor sequence

>5d2lJ (length=226) Species: 9606 (Homo sapiens) [Search protein sequence]

GVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQRLGQGLEFLIYFQGN
SAPDKSGLPSDRFSAERTSVSTLTIQRTQQEDSAVYLCASSQTQLWETQY
FGPGTRLLVLEDNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE
LSWWVNGKEVHSGVCTDPQPLKEQPNDSRYALSSRLRVSATFWQRNHFRC
QVQFYGLSENDEWAKPVTQIVSAEAW

3D structure

PDB

5d2l Structural Basis for Clonal Diversity of the Public T Cell Response to a Dominant Human Cytomegalovirus Epitope.

Chain

Resolution

3.511 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	J	Q98 W100	Q94 W96

External links

PDB	RCSB:5d2l, PDBe:5d2l, PDBj:5d2l
PDBsum	5d2l
PubMed	26429912

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