Structure of PDB 5c0a Chain J

Receptor sequence
>5c0aJ (length=244) Species: 9606 (Homo sapiens) [Search protein sequence]
GVIQSPRHEVTEMGQQVTLRCKPISGHDYLFWYRQTMMRGLELLIYFNNN
VPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLWEKLAK
NIQYFGAGTRLSVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF
YPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATF
WQDPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
3D structure
PDB5c0a Hotspot autoimmune T cell receptor binding underlies pathogen and insulin peptide cross-reactivity.
ChainJ
Resolution2.46 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide J D30 Y31 N51 W97 D28 Y29 N49 W95
External links
PDB RCSB:5c0a, PDBe:5c0a, PDBj:5c0a
PDBsum5c0a
PubMed27183389
UniProtA0A0B4J2E0;
A0A5B9|TRBC2_HUMAN T cell receptor beta constant 2 (Gene Name=TRBC2)

[Back to BioLiP]