Structure of PDB 5c09 Chain J

Receptor sequence
>5c09J (length=246) Species: 9606 (Homo sapiens) [Search protein sequence]
DAGVIQSPRHEVTEMGQQVTLRCKPISGHDYLFWYRQTMMRGLELLIYFN
NNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLWEKL
AKNIQYFGAGTRLSVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLAT
GFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSA
TFWQDPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
3D structure
PDB5c09 Hotspot autoimmune T cell receptor binding underlies pathogen and insulin peptide cross-reactivity.
ChainJ
Resolution2.475 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide J Y31 W97 Y31 W97
External links
PDB RCSB:5c09, PDBe:5c09, PDBj:5c09
PDBsum5c09
PubMed27183389
UniProtA0A0B4J2E0;
A0A5B9|TRBC2_HUMAN T cell receptor beta constant 2 (Gene Name=TRBC2)

[Back to BioLiP]