Structure of PDB 4llf Chain J

Receptor sequence
>4llfJ (length=321) Species: 12143 (Cucumber necrosis virus) [Search protein sequence]
IAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTN
GEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPL
VNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTD
NVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQP
TSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTII
FNSTVGGLTPSISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLT
GATNAQLFAVRAITENAVQVV
3D structure
PDB4llf Atomic structure of cucumber necrosis virus and the role of the capsid in vector transmission.
ChainJ
Resolution2.8891 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA J D173 D178 D114 D119
BS02 CA J D145 Q258 D86 Q199
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid
GO:0039617 T=3 icosahedral viral capsid

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Molecular Function
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Cellular Component
External links
PDB RCSB:4llf, PDBe:4llf, PDBj:4llf
PDBsum4llf
PubMed24006433
UniProtP15183|CAPSD_CNV Capsid protein (Gene Name=ORF2)

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