Structure of PDB 3pbp Chain J

Receptor sequence
>3pbpJ (length=439) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
RLSALPIFQASPRYIFSSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSR
HLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQI
FHYSIDEEEPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKP
IVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFYPFLP
SVLLLNEKDLNLILNKSLVMYESLDSTTDVIVKRNVIKQLQFVSKLHENW
NSRFGKVDIQKEYRLAKVQGPFTINPFPGELYDYTATNIATILIDNGQNE
IVCVSFDDGSLILLFKDLEMSMSWDVDNYVYNNSLVLIERVKLQREIKSL
ITLPEQLGKLYVISDNIIQQVNFMSWASTLSKSINESDLNPLAGLKFESK
LEDIATIERIPNLAYINWNDQSNLALMSNKTLTFQNISS
3D structure
PDB3pbp Structural and functional analysis of an essential nucleoporin heterotrimer on the cytoplasmic face of the nuclear pore complex.
ChainJ
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide J Y234 V243 Y221 V230
BS02 peptide J N228 K229 V232 N312 D330 E332 I351 L393 I397 S400 L402 L405 F410 N215 K216 V219 N299 D317 E319 I338 L380 I384 S387 L389 L392 F397
Gene Ontology
Molecular Function
GO:0017056 structural constituent of nuclear pore
Biological Process
GO:0000055 ribosomal large subunit export from nucleus
GO:0000056 ribosomal small subunit export from nucleus
GO:0006913 nucleocytoplasmic transport

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Molecular Function
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Biological Process
External links
PDB RCSB:3pbp, PDBe:3pbp, PDBj:3pbp
PDBsum3pbp
PubMed21930948
UniProtP40368|NUP82_YEAST Nucleoporin NUP82 (Gene Name=NUP82)

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