Structure of PDB 3hkz Chain J

Receptor sequence
>3hkzJ (length=1090) Species: 273057 (Saccharolobus solfataricus P2) [Search protein sequence]
LTIDERWRVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEIPTEIP
GLKVRLGKIRIGKPRVRESDRGEREISPMEARLRNLTYAAPLWLTMIPVE
NNIEAEPEEVYIGDLPIMLKSAIDPISQYTLDKLIEIGEDPKDPGGYFIV
NGSERVIVTQEDLAPNRVLVDTGKTGSNITHTAKIISSTAGYRVPVTIER
LKDGTFHVSFPAVPGKIPFVILMRALGILTDRDIVYAVSLDPEVQNELFP
SLEQASSIANVDDALDFIGSRVAIGQKRENRIEKAQQIIDKYFLPHLGTS
AEDRKKKAYYLAYAISKVIELYLGRREPDDKDHYANKRLRLAGDLFASLF
RVAFKAFVKDLTYQLEKSKVRGRKLALKALVRPDIVTERIRHALATGNWV
GGRTGVSQLLDRTNWLSMLSHLRRVISSLARGQPNFEARDLHGTQWGRMC
PFETPEGPNSGLVKNLALMAQIAVGINERIVEKTLYEMGVVPVEEVILKW
SKVILNGRLIGYYQDGGELANKIRERRRKGEISDEVNVGHIVTDFINEVH
VNCDSGRVRRPLIIVSNGNPLVTIEDIEKLESGAITFDDLVRQGKIEYLD
AEEEENAYVALEPNDLTPDHTHLEIWSPAILGITASIIPYPEHNQSPRNT
YQSAMAKQALGLYAANYQLRTDTRAHLLHYPQRPLVQTRALDIIGYTNRP
AGNNAILAVMSFTGYNMEDSIIMNRSSVERGMYRSTFFRLYSTEEVKYPG
GQEDKIVMPEAGVRGYKGKEYYRLLEDNGVVSPEVEVKGGDVLIGKVSPP
RAKRDTSIVTRHGEMGIVDLVLITETAEGNKLVKVRVRDLRIPTIGDKFA
SRHGQKGVIGMLIPQVDMPYTVKGVVPDIILNPHALPSRMTLGQIMEGIA
GKYAALSGNIVDATPFYKTPIEQLQNEILRYGYLPDATEVVYDGRTGQKI
KSRIYFGVVYYQKLHHMVADKLHARARGPVQILTRQPTEGRAREGGLRFG
EMERDCLIGFGTAMLLKDRLLDNSDRTMIYVCDQCGYIGWYDKNKNKYVC
PIHGDKSNLFPVTVSYAFKLLIQELMSMIISPRLVLEDKV
3D structure
PDB3hkz The X-ray crystal structure of RNA polymerase from Archaea.
ChainJ
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.6: DNA-directed RNA polymerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN J C1061 C1064 C1032 C1035
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0008270 zinc ion binding
GO:0016779 nucleotidyltransferase activity
GO:0032549 ribonucleoside binding
GO:0034062 5'-3' RNA polymerase activity
GO:0046872 metal ion binding
Biological Process
GO:0006351 DNA-templated transcription
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3hkz, PDBe:3hkz, PDBj:3hkz
PDBsum3hkz
PubMed18235446
UniProtQ980R1|RPO2_SACS2 DNA-directed RNA polymerase subunit Rpo2 (Gene Name=rpo2)

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