Structure of PDB 1nwx Chain J

Receptor sequence
>1nwxJ (length=141) Species: 1299 (Deinococcus radiodurans) [Search protein sequence]
HDLKPTPGSRKDRKRVGRGPGGTDKTAGRGHKGQKSRSGAGKGAFFEGGR
SRLIARLPKRGFNNVGTTYEVVKLSQLQDLEDTTFDRDTLEAYRLVRRKN
RPVKLLASGEISRAVTVHVDAASAAAIKAVEAAGGRVVLPE
3D structure
PDB1nwx Structural basis for the antibiotic activity of ketolides and azalides.
ChainJ
Resolution3.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna J G33 Q37 G42 G46 S54 L60 S111 G30 Q34 G39 G43 S51 L57 S108
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:1nwx, PDBe:1nwx, PDBj:1nwx
PDBsum1nwx
PubMed12623020
UniProtQ9RSK9|RL15_DEIRA Large ribosomal subunit protein uL15 (Gene Name=rplO)

[Back to BioLiP]