Structure of PDB 8yl9 Chain I

Receptor sequence
>8yl9I (length=346) Species: 104259 (Penicillium brasilianum) [Search protein sequence]
DFLSGAFHYSDSVNPSKYSPRPSDYFGTLPFRTSRFEREAADVTADYLRK
WQKAVKADNPERKDLVFHGSTTTLGHFVSWAYPECIPDRVDLCTQICDFG
FYWDDVTDSVNVQENAEITQDLALALLSELTLGQRLEPKLEINKIVVQML
WGVLDKDRKSGLEMIKFWKGHLDGQAESAHNMSFEEYTKHRLSEVGARWA
VEVGCWSLGINLSREKKDSVAHFVNKGLLAAALMNDYYSFNKEFDEHQRA
GSMDRLQNGLGILMREYGYTETEARSILREEIRKGERAIMDGYIAWRESA
DSSSESHELNRYIVMIILMIGGITFWSSHASRYHRDDLTTAGDRAM
3D structure
PDB8yl9 Structural Insights into the Terpene Cyclization Domains of Two Fungal Sesterterpene Synthases and Enzymatic Engineering for Sesterterpene Diversification.
ChainI
Resolution2.75 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.5.1.29: geranylgeranyl diphosphate synthase.
2.5.1.81: geranylfarnesyl diphosphate synthase.
4.2.3.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG I D105 D109 D104 D108
BS02 MG I D105 D109 D104 D108
BS03 MG I N237 S241 E245 N235 S239 E243
BS04 PPV I D105 R193 N237 S241 K244 E245 R334 Y335 D104 R191 N235 S239 K242 E243 R332 Y333
BS05 BTM I F78 G101 H172 W201 A202 F77 G100 H171 W199 A200
External links
PDB RCSB:8yl9, PDBe:8yl9, PDBj:8yl9
PDBsum8yl9
PubMed38584136
UniProtA0A2Z6AQX7|PBSS_PENBI Sesterbrasiliatriene synthase PbSS (Gene Name=PbSS)

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