Structure of PDB 8xmb Chain I

Receptor sequence
>8xmbI (length=113) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
STMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHS
VSERTQILTDVASDPTLPRTKAVRCSKCQHREAVFFQATARGEEGMTLFF
VCCNPNCGHRWRE
3D structure
PDB8xmb Transcription of the Plant RNA polymerase IV is prone to backtracking
ChainI
Resolution3.4 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN I C76 C103 C108 C75 C102 C107
BS02 ZN I C10 C29 C9 C28
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0046872 metal ion binding
Cellular Component
GO:0000419 RNA polymerase V complex
GO:0000428 DNA-directed RNA polymerase complex
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005665 RNA polymerase II, core complex
GO:0005730 nucleolus

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:8xmb, PDBe:8xmb, PDBj:8xmb
PDBsum8xmb
PubMed
UniProtQ6NLH0|RPB9A_ARATH DNA-directed RNA polymerases II, IV and V subunit 9A (Gene Name=NRPB9A)

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