Structure of PDB 8whx Chain I

Receptor sequence
>8whxI (length=165) Species: 246196 (Mycolicibacterium smegmatis MC2 155) [Search protein sequence]
SRIGKQPVPVPSGVDVTINGQNLSVKGPKGTLTLDVAEPISVSRAEDGAI
VVTRPDDERRSRSLHGLSRTLIANLVTGVTEGYTQKMEIFGVGYRVQLKG
QNLEFALGYSHPVLIEAPEGITFAVESPTKFSVSGIDKQKVGQISAVIRR
LRRPDPYKGKGVRYE
3D structure
PDB8whx Cryo- EM structure of the mycobacterial 70S ribosome in complex with ribosome hibernation promotion factor RafH.
ChainI
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna I S2 R3 I4 R60 R61 R63 S64 L68 N75 Y110 S111 H112 K139 Q140 G143 Q144 A147 R151 Y158 S1 R2 I3 R59 R60 R62 S63 L67 N74 Y109 S110 H111 K138 Q139 G142 Q143 A146 R150 Y157
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:8whx, PDBe:8whx, PDBj:8whx
PDBsum8whx
PubMed38245551
UniProtA0QSG4|RL6_MYCS2 Large ribosomal subunit protein uL6 (Gene Name=rplF)

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