Structure of PDB 8ugq Chain I

Receptor sequence
>8ugqI (length=213) Species: 10823 (Maize streak virus - [Nigeria]) [Search protein sequence]
AGSKADRPSLQIQTLQHAGTTMITVPSGGVCDLINTYARGSDEGNRHTSE
TLTYKIAIDYHFVADAAACRYSNTGTGVMWLVYDTTPGGQAPTPQTIFAY
PDTLKAWPATWKVSRELCHRFVVKRRWLFNMETDGRIGSDIPPSNASWKP
CKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAPGNGLTFTA
HGQTRLYFKSVGN
3D structure
PDB8ugq The two states of Maize Streak Virus (MSV) Geminivirus Architecture
ChainI
Resolution3.17 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna I K142 R145 H149 K112 R115 H119
BS02 dna I S39 L40 F190 R235 Y237 S9 L10 F160 R205 Y207
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005198 structural molecule activity
Biological Process
GO:0046718 symbiont entry into host cell
GO:0075732 viral penetration into host nucleus
Cellular Component
GO:0019028 viral capsid
GO:0039615 T=1 icosahedral viral capsid
GO:0042025 host cell nucleus
GO:0043657 host cell

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ugq, PDBe:8ugq, PDBj:8ugq
PDBsum8ugq
PubMed
UniProtP06448|CAPSD_MSVN Capsid protein (Gene Name=V1)

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