Structure of PDB 8spo Chain I

Receptor sequence
>8spoI (length=371) Species: 429344 (Maribacter polysiphoniae) [Search protein sequence]
RNKIFISHATPDDNDFTRWLALKLIGLGYEVWCDILFLDKGVDFWSNIEK
VIREDTCKFLLVSSSYSNQREGVLKELAVAAKVKKQLKDDKFIIPLAIDE
QLSYDDINIDIVRLNAIDFKMSWARGLKDILEAFEKQKVPKEVADASKSN
LLYQQEIYDSNWLSILSFPEELRVRELTFPAVRYKNYLCTFIPTEEILSG
SYDSNFIRNAECKRLIVQLLNKAFELRMKDKEVQEYEMSNKTAYWLEKGK
LEKDKFEKTMLVGKQKDKNWHFAISGASKLYPFPVLMISSHIFFTADGKK
LIDSSSVQHSSRRRQGKNWWNNTWRTKLLAFIKYLSDDDTSFYLEMGSEE
KVFVSNEPVKFKGNVSYNIPE
3D structure
PDB8spo Oligomerization-mediated activation of a short prokaryotic Argonaute.
ChainI
Resolution2.98 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna I K211 M287 S288 H340 H358 R362 K185 M238 S239 H291 H309 R313
BS02 dna I R201 R263 N270 H358 R362 K366 R175 R214 N221 H309 R313 K317
BS03 NAD I H9 A10 T11 D35 F45 E77 H8 A9 T10 D34 F44 E76
Gene Ontology
Biological Process
GO:0007165 signal transduction

View graph for
Biological Process
External links
PDB RCSB:8spo, PDBe:8spo, PDBj:8spo
PDBsum8spo
PubMed37494956
UniProtA0A316E683

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