Structure of PDB 8qrl Chain I

Receptor sequence
>8qrlI (length=137) Species: 9606 (Homo sapiens) [Search protein sequence]
TKFSIYPPIPGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPL
AFASCGTEGFRNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPG
RLSAMHGLIMGGLEVISITDNTPIPHAGCRPRKARKL
3D structure
PDB8qrl GTPBP8 plays a role in mitoribosome formation in human mitochondria.
ChainI
Resolution3.34 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna I H87 K89 N93 N94 Q96 Q98 N104 P106 S111 G113 T114 N119 A120 K122 K152 P180 I181 H183 X184 G185 C186 R187 P188 R189 K190 R192 K193 H30 K32 N36 N37 Q39 Q41 N47 P49 S54 G56 T57 N62 A63 K65 K95 P123 I124 H126 X127 G128 C129 R130 P131 R132 K133 R135 K136
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0006412 translation
GO:0032543 mitochondrial translation
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005763 mitochondrial small ribosomal subunit
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8qrl, PDBe:8qrl, PDBj:8qrl
PDBsum8qrl
PubMed38969660
UniProtP82912|RT11_HUMAN Small ribosomal subunit protein uS11m (Gene Name=MRPS11)

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