Structure of PDB 8q4f Chain I

Receptor sequence

>8q4fI (length=127) Species: 562 (Escherichia coli) [Search protein sequence]

NQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLE
LVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGF
VTRDARQVERKKVGLRKARRRPQFSKR

3D structure

PDB

8q4f Structure of arbekacin bound Escherichia coli 70S ribosome

Chain

Resolution

3.1 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	I	Q5 Y7 T9 R11 R12 K13 A16 R18 F20 Y38 G70 G71 I72 S73 Q75 R85 R95 R99 T105 R106 A108 R109 V111 E112 R113 K114 K115 G117 K120 R122 R123 R124 Q126 F127 R130	Q2 Y4 T6 R8 R9 K10 A13 R15 F17 Y35 G67 G68 I69 S70 Q72 R82 R92 R96 T102 R103 A105 R106 V108 E109 R110 K111 K112 G114 K117 R119 R120 R121 Q123 F124 R127
BS02	rna	I	K129 R130	K126 R127

External links

PDB	RCSB:8q4f, PDBe:8q4f, PDBj:8q4f
PDBsum	8q4f
PubMed
UniProt	P0A7X3\|RS9_ECOLI Small ribosomal subunit protein uS9 (Gene Name=rpsI)