Structure of PDB 8q4d Chain I

Receptor sequence
>8q4dI (length=247) Species: 1422 (Geobacillus stearothermophilus) [Search protein sequence]
NMKERIHEYCHRLHLPVMAERWSAMAEYASTHNISYSEFLFRLLEAEIVE
KQARSIQTLIKLSKLPYRKTIDTFDFTAQPSVDERRIRELLTLSFIDRKE
NILFLGPPGIGKTHLAISIGMEAIARGYKTYFITAHDLVNQLRRADQEGK
LEKKLRVFVKPTVLIIDQMGYLKLDPNSAHYLFQVIARRYEHAPIILTSN
KSFGEWGEIVGDSVLATAMLDRLLHHSIIFNLKGESYRLREKRLQEE
3D structure
PDB8q4d Molecular basis for transposase activation by a dedicated AAA+ ATPase.
ChainI
Resolution3.62 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna I R155 K159 R156 K160
BS02 MG I K111 T112 K112 T113
BS03 ATP I F73 D74 P107 G108 I109 G110 K111 T112 H113 Y170 Y236 R237 F74 D75 P108 G109 I110 G111 K112 T113 H114 Y171 Y237 R238
Gene Ontology
Biological Process
GO:0006260 DNA replication

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External links
PDB RCSB:8q4d, PDBe:8q4d, PDBj:8q4d
PDBsum8q4d
PubMed38926614
UniProtQ45619|ISTB_GEOSE Insertion sequence IS5376 putative ATP-binding protein

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