Structure of PDB 8pj1 Chain I

Receptor sequence

>8pj1I (length=150) Species: 9606 (Homo sapiens) [Search protein sequence]

GRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIG
VILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKH
LERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA

3D structure

PDB

8pj1 Structural basis for translational control by the human 48S initiation complex from codon scanning toward subunit joining

Chain

Resolution

3.4 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	I	G2 R3 M4 H5 G8 K9 G10 L11 S12 Q13 S14 A15 L16 P17 R20 S48 G51 R55 A61 Q62 R64 K70 L72 R73 K76 D87 H90 K94 H101 N105 R106 K107 D108 K112 F113 R114 S120 R121 R124 R127 Y128 K132	G1 R2 M3 H4 G7 K8 G9 L10 S11 Q12 S13 A14 L15 P16 R19 S47 G50 R54 A60 Q61 R63 K69 L71 R72 K75 D86 H89 K93 H100 N104 R105 K106 D107 K111 F112 R113 S119 R120 R123 R126 Y127 K131

External links

PDB	RCSB:8pj1, PDBe:8pj1, PDBj:8pj1
PDBsum	8pj1
PubMed
UniProt	P62277\|RS13_HUMAN Small ribosomal subunit protein uS15 (Gene Name=RPS13)

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