Structure of PDB 8fd3 Chain I

Receptor sequence
>8fd3I (length=494) Species: 2014529 (Nostoc sp. 'Peltigera membranacea cyanobiont' 210A) [Search protein sequence]
TQPKISLSLHAADTTIMHRVGMTGLYMTLKRLEKQYPLSRQRGGHISWFL
TADTIELFWEGSDFIALSWLINESFQLDDTGLIHLVGLDNDRIDLRQKIH
IHEGICGVFLRLNKFYQAGEIINTELRFEEKQVEYQYKSLTWYAHQTFAE
KLCEADTQQLRHDYIQITSWLYLGGIVRHARTQNTTKLEEKPEYALALLF
VPVVCHYCLLHIPSEDLKERKPHRYLVVIPEIKDFEDASQRRWRLQQLET
KQFHVSSLGEAGLLYYSLDDIQPEVAYYQACQVWLYEKTNKASRQRTLMS
IEEIKIDKNILITYQQVQKYFKTNYQIIKYKQIFIKVNPIRSLIADNLVK
GIHWWSNFWEKLVIEDSKEYLFNQLFSNREGFIIMAENSEEDKQYLIFIK
VFQQAMKGNFAKIYAKTEEGKDPPIKKKVERLRAELNYCYDELSFKEYLS
DFLVRGGLNKYFNEHQEEIALLIKKSPWQEIRIWSLLAIASYKP
3D structure
PDB8fd3 Molecular mechanism for Tn7-like transposon recruitment by a type I-B CRISPR effector.
ChainI
Resolution3.12 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna I L116 K118 F119 T172 S173 I180 V181 K191 R298 Q299 L112 K114 F115 T168 S169 I176 V177 K187 R294 Q295
BS02 dna I N117 K118 I125 Q140 K142 R298 N113 K114 I121 Q136 K138 R294
Gene Ontology
Biological Process
GO:0051607 defense response to virus

View graph for
Biological Process
External links
PDB RCSB:8fd3, PDBe:8fd3, PDBj:8fd3
PDBsum8fd3
PubMed37557170
UniProtA0A235IGR9

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