Structure of PDB 7yi4 Chain I

Receptor sequence
>7yi4I (length=107) Species: 8355 (Xenopus laevis) [Search protein sequence]
AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAE
ILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNI
QSVLLPK
3D structure
PDB7yi4 Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S.
ChainI
Resolution3.96 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna I A14 R17 R32 R42 A3 R6 R21 R31
BS02 dna I R29 R42 V43 A45 K75 T76 R77 R18 R31 V32 A34 K64 T65 R66
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:7yi4, PDBe:7yi4, PDBj:7yi4
PDBsum7yi4
PubMed37468628
UniProtP06897|H2A1_XENLA Histone H2A type 1

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