Structure of PDB 7v08 Chain I

Receptor sequence
>7v08I (length=131) Species: 1247190 (Saccharomyces cerevisiae BY4741) [Search protein sequence]
MGRYSVKRYKTKRRTRDLDLIYNDLSTKESVQKLLNQPLDETKPGLGQHY
CIHCAKYMETAIALKTHLKGKVHKRRVKELRGVPYTQEVSDAAAGYNLNK
FLNRVQEITQSVGPEKESNEALLKEHLDSTL
3D structure
PDB7v08 rRNA methylation by Spb1 regulates the GTPase activity of Nog2 during 60S ribosomal subunit assembly.
ChainI
Resolution2.36 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna I M1 G2 R3 Y4 S5 R8 Y9 K10 R13 K56 E59 T66 K71 R75 M1 G2 R3 Y4 S5 R8 Y9 K10 R13 K56 E59 T66 K71 R75
BS02 ZN I C51 C54 H67 H73 C51 C54 H67 H73
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding
GO:0043023 ribosomal large subunit binding
GO:0046872 metal ion binding
Biological Process
GO:0000055 ribosomal large subunit export from nucleus
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0030687 preribosome, large subunit precursor

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Molecular Function
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Cellular Component
External links
PDB RCSB:7v08, PDBe:7v08, PDBj:7v08
PDBsum7v08
PubMed36864048
UniProtQ08004|BUD20_YEAST Bud site selection protein 20 (Gene Name=BUD20)

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