Structure of PDB 6y5y Chain I

Receptor sequence
>6y5yI (length=275) Species: 1497391 (New Jersey polyomavirus-2013) [Search protein sequence]
ATTEIELWLEPRMGVNAPTGDRKEWYGYSEVIHHADGYDNNLLSVQMPQY
SCARVQLPMLNTDMTCETLMMWEAVSCKTEVVGIGSLISVHLLEAKMEAG
PNSDGPSRPIEGMNYHMFAVGGEPLDLQGIESNGQTKYATAIPAKSIHPN
DIAKLPEEDKAQLQGLVPKAKAKLDKDGFYPVEEWSPDPSRNENSRYYGS
FVGGLQTPPNLQFTNAVSTVLLDENGVGPLCKGDGLFVSCADICGVLVKA
DNEAIRYRGLPRYFKVTLRKRAVKN
3D structure
PDB6y5y Structural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family.
ChainI
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GAL I K296 D298 K249 D251
BS02 SIA I R69 E77 V78 H80 K296 N299 R22 E30 V31 H33 K249 N252
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid

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Molecular Function
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Cellular Component
External links
PDB RCSB:6y5y, PDBe:6y5y, PDBj:6y5y
PDBsum6y5y
PubMed32723915
UniProtA0A024B5J2

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