Structure of PDB 6vr8 Chain I

Receptor sequence
>6vr8I (length=482) Species: 2180 (Methanothermus fervidus) [Search protein sequence]
ATPAGSHMRLSELASYVSGKLIGEDKEIKVGIFNTLGDANPNDIVIRHWI
DEKGVEIAKNKEVSALITQNPKGNSLEYAKKLKVPIILVNKIELASAFAI
KWTIKNFAPNTYRVVITGTNGKSTTTHMIYHILTHAGKKAFTNTDAKSEF
NTLIDPMVAKLLAEKAKKENLEYLVIEVSEVQGWLDRLMKDHAYLMTKSI
NPNVVVVTNVALDHIGLVNSIEEVFEETSGAVKALEKGFAVLNYDNEFTR
KMAKLTNKNVKVFFYGKNCPVTFKSGGIYVNNDLFIKKEELPFKSEYFIQ
NTLAAISACLCLNIPPDIIKKGILTYKPLKRRFSILCKKPLIIDDFAHNP
DGIKMAIKSAKKLTKNKLWVVCAIRGSRGKIINKLNAESLSKTLKNIENY
EVVITNSDDVVDNLNKVKKEEEKTFLKTLEKYNINYRFHKKLKTALEETL
TNCKKDDTILLIGAQGMDPASKLLKKIKVIPC
3D structure
PDB6vr8 Structural characterisation of methanogen pseudomurein cell wall peptide ligases homologous to bacterial MurE/F murein peptide ligases.
ChainI
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.3.2.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 UDP I Q62 K84 E86 W177 R180 L181 K183 Q69 K91 E93 W184 R187 L188 K190
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0005524 ATP binding
GO:0016874 ligase activity
GO:0016881 acid-amino acid ligase activity
Biological Process
GO:0009058 biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:6vr8, PDBe:6vr8, PDBj:6vr8
PDBsum6vr8
PubMed36178458
UniProtE3GZ29

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