Structure of PDB 6rlp Chain I

Receptor sequence
>6rlpI (length=153) Species: 12242 (Tobacco mosaic virus) [Search protein sequence]
SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSE
VWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQA
NPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGL
VWT
3D structure
PDB6rlp Cryo-EM reconstruction of TMV coat protein
ChainI
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna I Q38 R90 R92 Q38 R90 R92
BS02 rna I R112 D115 D116 V119 A120 S123 R112 D115 D116 V119 A120 S123
BS03 rna I Q34 T37 Q38 Q39 E95 Q34 T37 Q38 Q39 E95
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
GO:0042802 identical protein binding
Cellular Component
GO:0019028 viral capsid
GO:0019029 helical viral capsid

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6rlp, PDBe:6rlp, PDBj:6rlp
PDBsum6rlp
PubMed31205015
UniProtP69687|CAPSD_TMV Capsid protein (Gene Name=CP)

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