Structure of PDB 6mtd Chain I

Receptor sequence

>6mtdI (length=205) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

GRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGH
MVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINK
MLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVVEALRRAKFKF
PGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPLDKW
RALHS

3D structure

PDB

6mtd Structures of translationally inactive mammalian ribosomes.

Chain

Resolution

3.3 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	I	R3 R4 A6 R7 C8 Y9 K15 P16 Y17 F22 R24 K30 D35 K39 K40 S61 E63 A64 R90 H92 F94 R98 N100 M102 M115 R116 A118 F119 Q133 F157 K158 P160 R162 D193 K198	R2 R3 A5 R6 C7 Y8 K14 P15 Y16 F21 R23 K29 D34 K38 K39 S60 E62 A63 R89 H91 F93 R97 N99 M101 M106 R107 A109 F110 Q124 F148 K149 P151 R153 D184 K189
BS02	rna	I	Y11 E56 Y57 Y199 N202 R203 G204 P205 L206	Y10 E55 Y56 Y190 N193 R194 G195 P196 L197

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0000027	ribosomal large subunit assembly
GO:0006412	translation
GO:0006417	regulation of translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Cellular Component

External links

PDB	RCSB:6mtd, PDBe:6mtd, PDBj:6mtd
PDBsum	6mtd
PubMed	30355441
UniProt	B7NZQ2\|RL10_RABIT Large ribosomal subunit protein uL16 (Gene Name=RPL10)

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