Structure of PDB 5tj4 Chain I

Receptor sequence
>5tj4I (length=535) Species: 562 (Escherichia coli) [Search protein sequence]
KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQV
AATGDGPDIIFWAHDRFGGYAQSGLLAEITPAAAFQDKLYPFTWDAVRYN
GKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFN
LQEPYFTWPLIAADGGYAFKYAAGKYDIKDVGVDNAGAKAGLTFLVDLIK
NKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSAVNYGVTVLPTF
KGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLG
AVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINA
ASGRQTVDAALAAAQTNAAAMSAGLDIHFRGKTSRNMKEKLEDMESVLKD
LTEEKRKDVLNSLAKCLGKEDIRQDLEQRVSEVLISGELHMEDPDKPLLS
SLFNAAGVLVEARAKAILDFLDALLELSEEQQFVAEALEKGTLPLLKDQV
KSVMEQNWDELAYDPEARILCALYVVVSILLELAE
3D structure
PDB5tj4 Gene polymorphism linked to increased asthma and IBD risk alters gasdermin-B structure, a sulfatide and phosphoinositide binding protein.
ChainI
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GLC I D14 E111 E153 Y155 W230 D14 E111 E153 Y155 W230
BS02 GLC I D65 R66 E153 P154 Y155 W340 D65 R66 E153 P154 Y155 W340
Gene Ontology
Molecular Function
GO:0015144 carbohydrate transmembrane transporter activity
Biological Process
GO:0008643 carbohydrate transport
GO:0055085 transmembrane transport

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Molecular Function
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Biological Process
External links
PDB RCSB:5tj4, PDBe:5tj4, PDBj:5tj4
PDBsum5tj4
PubMed28154144
UniProtQ8TAX9|GSDMB_HUMAN Gasdermin-B (Gene Name=GSDMB)

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