Structure of PDB 5kd7 Chain I

Receptor sequence
>5kd7I (length=266) Species: 10090 (Mus musculus) [Search protein sequence]
SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARW
IEQEGPEYWERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGC
DVESDRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAGA
AERDRAYLEGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRGDVTLRCW
ALGFYPADITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVPLGKE
QKYTCHVEHELTLRWG
3D structure
PDB5kd7 Effects of Cross-Presentation, Antigen Processing, and Peptide Binding in HIV Evasion of T Cell Immunity.
ChainI
Resolution2.35 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide I Y7 E63 R66 N70 F74 D77 Y84 W97 W114 T143 W147 A150 A152 R155 Y159 W167 Y171 Y6 E62 R65 N69 F73 D76 Y83 W96 W112 T141 W145 A148 A150 R153 Y157 W165 Y169
External links
PDB RCSB:5kd7, PDBe:5kd7, PDBj:5kd7
PDBsum5kd7
PubMed29374075
UniProtP01900|HA12_MOUSE H-2 class I histocompatibility antigen, D-D alpha chain (Gene Name=H2-D1)

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