Structure of PDB 4w9k Chain I

Receptor sequence
>4w9kI (length=142) Species: 9606 (Homo sapiens) [Search protein sequence]
VLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHS
YRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKER
CLQVVRSLVKPENYRRLDIVSLYEDLEDHPNVQKDLERLTQE
3D structure
PDB4w9k Structure-Guided Design and Optimization of Small Molecules Targeting the Protein-Protein Interaction between the von Hippel-Lindau (VHL) E3 Ubiquitin Ligase and the Hypoxia Inducible Factor (HIF) Alpha Subunit with in Vitro Nanomolar Affinities.
ChainI
Resolution2.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 3JO I R69 F76 W88 Y98 P99 I109 H110 S111 Y112 H115 W117 R8 F15 W27 Y37 P38 I48 H49 S50 Y51 H54 W56 MOAD: Kd=0.291uM
BindingDB: Kd=291nM
External links
PDB RCSB:4w9k, PDBe:4w9k, PDBj:4w9k
PDBsum4w9k
PubMed25166285
UniProtP40337|VHL_HUMAN von Hippel-Lindau disease tumor suppressor (Gene Name=VHL)

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