Structure of PDB 4bmv Chain I

Receptor sequence
>4bmvI (length=254) Species: 13690 (Sphingobium yanoikuyae) [Search protein sequence]
LPTVLITGASSGIGATYAERFARRGHDLVLVARDKVRLDALAARLRDESG
VAVEALQADLTRPADLAAVEIRLREDARIGILINNAGMAQSGGFVQQTAE
GIERLITLNTTALTRLAAAVAPRFVQSGTGAIVNIGSVVGFAPEFGMSIY
GATKAFVLFLSQGLNLELSPSGIYVQAVLPAATRTEIWGRAGIDVTLPEV
MEVDELVDAALVGFDRRELVTIPPLHVAARWDALDGARQGLMSDIRQAQA
ADRY
3D structure
PDB4bmv Structures of Alcohol Dehydrogenases from Ralstonia and Sphingobium Spp. Reveal the Molecular Basis for Their Recognition of 'Bulky-Bulky' Ketones
ChainI
Resolution2.5 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) N112 S140 Y153 K157
Catalytic site (residue number reindexed from 1) N109 S137 Y150 K154
Enzyme Commision number 1.1.1.1: alcohol dehydrogenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAP I G11 S13 S14 G15 I16 A35 R36 D37 A61 D62 L63 N88 G90 L111 I138 S140 Y153 K157 P183 T186 T188 E189 I190 W191 G8 S10 S11 G12 I13 A32 R33 D34 A58 D59 L60 N85 G87 L108 I135 S137 Y150 K154 P180 T183 T185 E186 I187 W188
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0016491 oxidoreductase activity
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:4bmv, PDBe:4bmv, PDBj:4bmv
PDBsum4bmv
PubMed
UniProtB9U359

[Back to BioLiP]