Structure of PDB 6qnr Chain H8

Receptor sequence
>6qnrH8 (length=179) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
MEYRLKAYYREGEKPSALRRAGKLPGVMYNRHLNRKVYVDLVEFDKVFRQ
ASIHHVIVLELPDGQSLPTLVRQVNLDKRRRRPEHVDFFVLSDEPVEMYV
PLRFVGTPAGVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSL
HASDLKLPPGVELAVSPEETIAAVVPPED
3D structure
PDB6qnr Importance of potassium ions for ribosome structure and function revealed by long-wavelength X-ray diffraction.
ChainH8
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna H8 S149 E169 T170 P177 E178 S149 E169 T170 P177 E178
BS02 rna H8 R10 P15 R19 Y29 N30 N34 R72 Q73 R79 E84 H85 D87 R10 P15 R19 Y29 N30 N34 R72 Q73 R79 E84 H85 D87
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6qnr, PDBe:6qnr, PDBj:6qnr
PDBsum6qnr
PubMed31175275
UniProtQ5SHZ1|RL25_THET8 Large ribosomal subunit protein bL25 (Gene Name=rplY)

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