Structure of PDB 8ckb Chain H001

Receptor sequence
>8ckbH001 (length=688) Species: 2301731 (Bacteroides phage crAss001) [Search protein sequence]
NFPRQMLPFSKKTKQWRKDCLLWANQKNYSLVRKSVIHKKINYDLLNGRL
HMSDLELVLIKAAYIPDRLQHYPIMNSKLNVLRGEESKRVFDFKVVVTNP
NAISEIEDNKKNELLQRLQEMITDTSISEDEYNIKLEKLNDYYTYEWQDI
REVRANELLNHYIKEYDIPLIFNNGFMDAMTCGEEIYQCDIVGGEPVIER
VNPLKIRIFKSGYSNKVEDADMIILEDYWSPGRVIDTYYDVLSPKDIKYI
ETMPDYIGQGAVDQMDNIDERYGFVNQNMISLLPYDLAGNLRVLRLYWKS
KRKILKVKSYDPETGEEEWNFYPENYVVNKEAGEEVQSFWVNEAWEGTMI
GNEIFVNMRPRLIQYNRLNNPSRCHFGIVGSIYNLNDSRPFSLVDMMKPY
NYLYDAIHDRLNKAIASNWGSILELDLSKVPKGWDVGKWMYYARVNHIAV
IDSFKEGTIGASTGKLAGALNNAGKGMIETNIGNYIQQQINLLEFIKMEM
ADVAGISKQREGTLQSSHITEWLFTIHDDVKKRALECFLETAKVALKGRN
KKFQYILSDTSTRVMEIDGDEFAEADYGLVVDNSNGTQELQQKLDTLAQA
ALQTQTLSFSTITKLYTSSSLAEKQRLIEKDEKQIRERQAQAQKEQLEAQ
QQIAAMQQQQKEAELLQKEEANIRDNQTKIIIAQIQSE
3D structure
PDB8ckb Structural atlas of the most abundant human gut virus
ChainH001
Resolution4.39 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG H001 E119 Q160 E107 Q148
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:8ckb, PDBe:8ckb, PDBj:8ckb
PDBsum8ckb
PubMed
UniProtA0A385DT68|PORTL_BPCA1 Portal protein (Gene Name=crAss001_20)

[Back to BioLiP]