Structure of PDB 8y6u Chain H

Receptor sequence
>8y6uH (length=92) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGL
KLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSA
3D structure
PDB8y6u NMR analysis of a loop-bulge structure of UUCGA pentaloop.
ChainH
Resolution3.97 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna H F23 S38 H39 R58 F23 S38 H39 R58
BS02 dna H N9 V32 T33 A35 A36 H39 Q40 N57 N9 V32 T33 A35 A36 H39 Q40 N57
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006351 DNA-templated transcription
GO:0006355 regulation of DNA-templated transcription
GO:0009411 response to UV
Cellular Component
GO:0005737 cytoplasm

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Cellular Component
External links
PDB RCSB:8y6u, PDBe:8y6u, PDBj:8y6u
PDBsum8y6u
PubMed38039839
UniProtP0A9F6|GCVA_ECOLI Glycine cleavage system transcriptional activator (Gene Name=gcvA)

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