Structure of PDB 8rjd Chain H

Receptor sequence

>8rjdH (length=190) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

MKTILSNQTVDIPENVDISLKGRTVIVKGPRGTLRRDFNHINVELSLLGK
KKKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFP
INVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELVLEGND
IELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQA

3D structure

PDB

8rjd UCSF ChimeraX: Meeting modern challenges in visualization and analysis.

Chain

Resolution

2.78574 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	H	R23 H40 N42 V43 G49 K50 K51 K52 W60 R64 K65 A68 R71 T72 S75 H76 N79 H98 F99 E120 K121 Y122 R129 E152 S155 Q163 K168 K170 D171 R173 K174 F175 K184	R23 H40 N42 V43 G49 K50 K51 K52 W60 R64 K65 A68 R71 T72 S75 H76 N79 H98 F99 E120 K121 Y122 R129 E152 S155 Q163 K168 K170 D171 R173 K174 F175 K184

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

	Biological Process
GO:0002181	cytoplasmic translation
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:8rjd, PDBe:8rjd, PDBj:8rjd
PDBsum	8rjd
PubMed	38896445
UniProt	G1SWI6\|RL9_RABIT Large ribosomal subunit protein uL6 (Gene Name=RPL9)

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