Structure of PDB 8pnc Chain H

Receptor sequence
>8pncH (length=60) Species: 9606 (Homo sapiens) [Search protein sequence]
KPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWY
QNRRTKWKRQ
3D structure
PDB8pnc Transcription factor BARHL2 bound to different DNA sequences
ChainH
Resolution2.05 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna H T272 D273 T42 D43
BS02 dna H R233 K234 R236 T237 F239 W279 N282 K286 R3 K4 R6 T7 F9 W49 N52 K56
BS03 dna H R233 R236 Y256 R262 K277 Q281 R284 R3 R6 Y26 R32 K47 Q51 R54
External links
PDB RCSB:8pnc, PDBe:8pnc, PDBj:8pnc
PDBsum8pnc
PubMed
UniProtQ9NY43|BARH2_HUMAN BarH-like 2 homeobox protein (Gene Name=BARHL2)

[Back to BioLiP]