Structure of PDB 8kcb Chain H

Receptor sequence
>8kcbH (length=88) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
GGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFL
ENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
3D structure
PDB8kcb Mechanism of heterochromatin remodeling revealed by the DDM1 bound nucleosome structures.
ChainH
Resolution3.17 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna H R35 I46 S47 R78 K79 T80 R23 I34 S35 R66 K67 T68
BS02 dna H T30 P32 R36 T18 P20 R24
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
Biological Process
GO:0009414 response to water deprivation
Cellular Component
GO:0000325 plant-type vacuole
GO:0000786 nucleosome
GO:0005576 extracellular region
GO:0005634 nucleus
GO:0005694 chromosome
GO:0005730 nucleolus
GO:0005777 peroxisome
GO:0005794 Golgi apparatus
GO:0005829 cytosol
GO:0005886 plasma membrane
GO:0009506 plasmodesma
GO:0009507 chloroplast
GO:0009536 plastid
GO:0009579 thylakoid

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Molecular Function
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Cellular Component
External links
PDB RCSB:8kcb, PDBe:8kcb, PDBj:8kcb
PDBsum8kcb
PubMed38870940
UniProtP59259|H4_ARATH Histone H4 (Gene Name=At1g07660)

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