Structure of PDB 8k29 Chain H

Receptor sequence

>8k29H (length=302) Species: 979527 (Vibrio phage ICP1_2004_A) [Search protein sequence]

TKLKAPAVLAYSRKINPTNALMFAVNWSDRDNTTAVMVGTKTVAGTQSVR
GNPNDADKGNIQTVNFANLPHNKNTLLVKYNVKFVGDVFKAELGGGEYSN
TLQTALENTDFGTLAYRYVYNIAAGRTLWRNRVGAESIETVITVNDQTFT
FSDLLVNEFDEDVDVAEIADMVAGVLSGEGFVTLKVEHYMLLGEGSEVFP
SQEFVENSKLSKQLFDLNGQAAMHDQKIGNAIRTIDTWYEDATTPIAVEP
YGSVVRNGVAYRAGNKTDLFTLMDGAVNGKSLTEEDQMFVTANLIRGGVF
GG

3D structure

PDB

8k29 Structure of csy complex with long DNA State2

Chain

Resolution

3.18 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	H	S13 R14 G46 T47 L94 W130 R131 Q203 E204 Q227 K228 N231 R234 R257 R297 G298 G299 V300	S12 R13 G45 T46 L93 W129 R130 Q202 E203 Q226 K227 N230 R233 R256 R296 G297 G298 V299
BS02	dna	H	A8 V9 F205 E207 V300	A7 V8 F204 E206 V299

External links

PDB	RCSB:8k29, PDBe:8k29, PDBj:8k29
PDBsum	8k29
PubMed
UniProt	F1D5V6

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