Structure of PDB 8jjr Chain H

Receptor sequence
>8jjrH (length=192) Species: 2950 (Symbiodinium sp.) [Search protein sequence]
PFAGGLIGGESAFAGQDFNFDPLGLATKCEKFLPWFREAELKHGRIAMLA
WVGLVAPEFVRIPGPEQCYGAKTVVEAHNACAGDPYFPFIIDATDFYGKD
GHQVGPLFQVFAFCGAVEMLTTFAKTANVSNKPGLTLANAGDYRLGANFL
PEDEAKAKEMKLKELKNGRLAMLAFGGAITQATLTGNGFPWL
3D structure
PDB8jjr Architecture of symbiotic dinoflagellate photosystem I-light-harvesting supercomplex in Symbiodinium.
ChainH
Resolution2.8 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CLA H A172 F175 A93 F96
BS02 DD6 H I170 F175 Q182 Q188 I91 F96 Q103 Q109
BS03 KC2 H A91 F97 K245 A12 F18 K166
BS04 CLA H L85 G87 G88 F97 N98 F99 F115 E119 H122 R248 L252 L6 G8 G9 F18 N19 F20 F36 E40 H43 R169 L173
BS05 CLA H C108 W114 F115 H122 C29 W35 F36 H43
BS06 CLA H A129 G132 P136 V139 R140 Y148 A156 C160 A50 G53 P57 V60 R61 Y69 A77 C81
BS07 CLA H Y148 P185 Q188 F192 Y69 P106 Q109 F113
BS08 CLA H H157 A161 P167 F168 L186 F187 V189 F190 H78 A82 P88 F89 L107 F108 V110 F111
BS09 CLA H W114 A118 K121 H122 I125 F190 G194 E197 T201 W35 A39 K42 H43 I46 F111 G115 E118 T122
BS10 CLA H R124 D221 Y222 L224 G225 L229 M239 K240 E243 N246 R45 D142 Y143 L145 G146 L150 M160 K161 E164 N167
BS11 CLA H A91 L241 K242 K245 N246 L249 A12 L162 K163 K166 N167 L170
BS12 KC2 H M239 K242 N246 L249 M160 K163 N167 L170
BS13 CLA H G255 G256 T259 Q260 G176 G177 T180 Q181
BS14 CLA H T259 T262 L263 T180 T183 L184
BS15 UIX H M127 W130 L224 L249 A253 Q260 P269 M48 W51 L145 L170 A174 Q181 P190
BS16 DD6 H F99 D100 P101 L102 I125 A129 V153 M251 F254 F20 D21 P22 L23 I46 A50 V74 M172 F175
BS17 DD6 H R248 L252 R169 L173
BS18 UIX H K121 I141 P142 G143 E197 K42 I62 P63 G64 E118
BS19 DD6 H F99 V154 H157 N158 F254 G255 I258 F20 V75 H78 N79 F175 G176 I179
BS20 CLA H F202 A206 F123 A127
BS21 CLA H F168 I169 I170 A172 T173 A191 M198 F89 I90 I91 A93 T94 A112 M119
BS22 DD6 H F168 I169 F89 I90
Gene Ontology
Biological Process
GO:0009765 photosynthesis, light harvesting
Cellular Component
GO:0016020 membrane

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8jjr, PDBe:8jjr, PDBj:8jjr
PDBsum8jjr
PubMed38493166
UniProtA0AA36NGX7

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