Structure of PDB 8ipd Chain H

Receptor sequence
>8ipdH (length=122) Species: 9606 (Homo sapiens) [Search protein sequence]
AKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVR
KSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEEN
LKTKKQQRKERLYPLRKYAVKA
3D structure
PDB8ipd Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
ChainH
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna H K3 K5 A41 S45 R48 K52 R56 L58 T59 N62 Q63 K66 R70 R84 K86 T88 R89 R92 K2 K4 A40 S44 R47 K51 R55 L57 T58 N61 Q62 K65 R69 R83 K85 T87 R88 R91
BS02 rna H R70 K74 K77 R93 R94 L95 N96 K97 H98 K106 R109 R112 R69 K73 K76 R92 R93 L94 N95 K96 H97 K105 R108 R111
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0016020 membrane
GO:0022625 cytosolic large ribosomal subunit
GO:0022626 cytosolic ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ipd, PDBe:8ipd, PDBj:8ipd
PDBsum8ipd
PubMed37491604
UniProtP42766|RL35_HUMAN Large ribosomal subunit protein uL29 (Gene Name=RPL35)

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