Structure of PDB 8dej Chain H

Receptor sequence
>8dejH (length=286) Species: 882 (Nitratidesulfovibrio vulgaris str. Hildenborough) [Search protein sequence]
MTAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRK
IRNHVALTKEGAERFNIYIQEKAILNETHERAYTACDLKPEPKKLPKKVE
DAKRVTDWMCTNFYDIRTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQ
EVSITRMAVTTKAEAEDNRTMGRKHIVPYGLYVAHGFISAPLAEKTGFSD
EDLTLFWDALVNMFEHDRSAARGLMSSRKLIVFKHQNRLGNAPAHKLFDL
VKVSRAEGSSGPARSFADYAVTVGQAPEGVEVKEML
3D structure
PDB8dej Structural snapshots of R-loop formation by a type I-C CRISPR Cascade.
ChainH
Resolution2.86 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna H N22 G23 P25 V45 K48 R49 A121 V122 Q131 R133 R226 N22 G23 P25 V45 K48 R49 A121 V122 Q131 R133 R222
Gene Ontology
Biological Process
GO:0043571 maintenance of CRISPR repeat elements

View graph for
Biological Process
External links
PDB RCSB:8dej, PDBe:8dej, PDBj:8dej
PDBsum8dej
PubMed36805026
UniProtQ72WF7

[Back to BioLiP]