Structure of PDB 7dbh Chain H

Receptor sequence
>7dbhH (length=93) Species: 10090 (Mus musculus) [Search protein sequence]
GRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLA
HYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSS
3D structure
PDB7dbh Unusual nucleosome formation and transcriptome influence by the histone H3mm18 variant.
ChainH
Resolution3.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna H I39 Y40 I8 Y9
BS02 dna H R33 Y42 R86 S87 T88 R2 Y11 R55 S56 T57
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:7dbh, PDBe:7dbh, PDBj:7dbh
PDBsum7dbh
PubMed34929737
UniProtQ9D2U9|H2B3A_MOUSE H2B.U histone 2 (Gene Name=H2bu2)

[Back to BioLiP]