Structure of PDB 6yam Chain H

Receptor sequence
>6yamH (length=191) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
TPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRK
AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLV
NAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAF
RNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR
3D structure
PDB6yam Structural Insights into the Mammalian Late-Stage Initiation Complexes.
ChainH
Resolution3.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna H Y56 A58 K59 R60 K63 N74 M76 M78 H79 G80 R81 N82 G84 M88 N148 W152 R159 F163 R164 N165 I166 T168 I169 Y43 A45 K46 R47 K50 N61 M63 M65 H66 G67 R68 N69 G71 M75 N135 W139 R146 F150 R151 N152 I153 T155 I156
BS02 rna H A131 G132 A118 G119
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0015935 small ribosomal subunit

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Cellular Component
External links
PDB RCSB:6yam, PDBe:6yam, PDBj:6yam
PDBsum6yam
PubMed
UniProtU3KMN4

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