Structure of PDB 6vry Chain H

Receptor sequence
>6vryH (length=225) Species: 9544 (Macaca mulatta) [Search protein sequence]
QVQLQESGPGLVKPSETLSLTCAVSGGSISDYYYWNWIRQFPGKGLEWIG
NIYGKSASTYYNPSLKSRVSISKDTSKNQFFLKLSSVTAADTAVYYCARE
YCIGSTCYPILDSWGQGAVVTVSSASTKGPSVFPLAPSSKSTSGGTAALG
CLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL
GTQTYICNVNHKPSNTKVDKRVEPK
3D structure
PDB6vry HIV vaccine candidate with V1 deletion reveals virus vulnerability to V2 antibodies
ChainH
Resolution1.4 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide H Y32 Y33 Y34 Y52 S54 S56 Y58 E95 S100 T100A C100B Y100C P100D Y32 Y33 Y34 Y53 S56 S58 Y60 E100 S105 T106 C107 Y108 P109
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