Structure of PDB 6vbo Chain H

Receptor sequence

>6vboH (length=210) Species: 9606 (Homo sapiens) [Search protein sequence]

EVQLVQSGAEVKKPGESLKISCKGSGYKFSDYWIGWVRQMPGKGLESMGI
IYPGDSDTRYSPSFQGQVTISADKSINTAYLQWNTLKASDTAMYYCAIVG
AKADYWGQGTLVTVSSASTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVS
WNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPS
NTKVDKRVEP

3D structure

PDB

6vbo HIV vaccine delayed boosting increases Env variable region 2-specific antibody effector functions.

Chain

Resolution

1.683 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	H	V2 Y32 W33 Y52 D54 D56 G96 A97 K98	V2 Y32 W33 Y52 D55 D57 G100 A101 K102

External links

PDB	RCSB:6vbo, PDBe:6vbo, PDBj:6vbo
PDBsum	6vbo
PubMed	31996483

[Back to BioLiP]