Structure of PDB 6uvn Chain H

Receptor sequence

>6uvnH (length=337) Species: 666 (Vibrio cholerae) [Search protein sequence]

LKLPTNLAYERSIDPSDVCFFVVWPDDRKTPLTYNSRTLLGQMEAASLAY
DVSGQPIKSATAEALAQGNPHQVDFCHVPYGASHIECSFSVSFSSELRQP
YKCNSSKVKQTLVQLVELYETKIGWTELATRYLMNICNGKWLWKNTRKAY
CWNIVLTPWPWNGEKVGFEDIRTNYTSRQDFKNNKNWSAIVEMIKTAFSS
TDGLAIFEVRATLHLPTNAMVRPSQVFTNSRVFQSTTIDGERSPILGAFK
TGAAIATIDDWYPEATEPLRVGRFGVHREDVTCYRHPSTGKDFFSILQQA
EHYIEVLSANKTPAQETINDMHFLMANLIKGGMFQHK

3D structure

PDB

6uvn Cryo-EM structure of a type I-F CRISPR RNA guided surveillance complex bound to transposition protein TniQ.

Chain

Resolution

3.1 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	H	A11 Y12 L42 L43 Q45 H74 Y104 K105 W146 S227 Q228 F230 T231 S246 F265 K266 A269 R286 R294 K346 G347 G348 M349	A8 Y9 L39 L40 Q42 H71 Y101 K102 W143 S224 Q225 F227 T228 S230 F249 K250 A253 R270 R278 K330 G331 G332 M333

External links

PDB	RCSB:6uvn, PDBe:6uvn, PDBj:6uvn
PDBsum	6uvn
PubMed	31900425

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